Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902239.1_cds_XP_016452252.1_46512
CDS Infomation

[gene=LOC107776831] [db_xref=GeneID:107776831] [protein=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like] [protein_id=XP_016452252.1] [location=join(144040..144432,144547..144612,145428..145487,145627..145678,147098..147210,147631..147807,149477..149575,150205..150303,152721..152770,152845..152933,154577..154736,156146..156251,156349..156531,156828..157058,158764..158877)] [gbkey=CDS]
Sequence

ATGGTGGTTGCCGAGCTTTCCGATCACAACAATGACTGCACGGAAGTGGTGGTCCCAAGA
CGTTGCAGTGCTAGAATCAAGACTTTGCAGAGTCAACAGGAAGCTCAGCGAACACGGTGC
CGCTCCAACGACGACCCAGCTCTTGAGAAGAAAGCAAAGGCTCATAAGGCGAGAAAGGCG
GATACTCCCGCTATGACACCACAAGCTATTGATAATGACATCACGGGGACCAATCCGCCA
AATGACTGCACCTACGATAATCATCATCCTGTTGCTGAAGCCTCCCAGAGTCAGAGTCCC
CATCTTAACGGGGACGGGACTGAGAAAAGTGCGCATCTAAGGGTAACAGAGACTGTTCGG
AGATTTAACAAGCATTATCTCCATCTCGTTCAGGAAGAGGAGATAAGGTGTAGAAGAGTT
CAAGATGAACAGAAAACAAAGAAGCATTCAAAATCTAAGGAAGCTGAAGATGATGGTAAA
CGCAGTTCCAAGCGCCCTGATCTAAAAGCGATTTCTAAGATGATATTGGCAAAGGAGGTT
TTGAATTCTGAGAAAATTGGCTCCATTCCAGGCATTGATGTTGGTCATCAATTCTTTTCG
CGTGCGGAGATGGTCGTTGTTGGATTCCATAACCATTGGCTAAACGGCATTGATTATGTT
GGCCAAACTGCTGGGAAAAAAGGGGAGTACAGAGGCTACAGATTGCCCCTTGCTGTATCT
ATTGTCCTATCAGGACAGTATGAGGACGACCAGGACAACTATGAAGAGGTTGTCTATACT
GGTCAAGGTGGAAATGATCTACTTGGTAACAAGCGCCAAATAAAGGATCAAGTCATGGAA
CGGGGTAATCTAGGGCTCAAGAATTGTATGGAGCAATCTGTCCCTGTTAGGGTTACACGT
GGACATCGGTGTGTGAATAGTTACGTTGGAAAGGTTTACACCTATGACGGCTTGTATAGG
GTTGTAAATTACTGGGCAGAGAAGGGTATTTCTGGATTCACCGTTTTTAAATACCGATTA
AAGCGTATCGAGGGACAACCTGTGTTAACCACCAACCAGGTACATTTTACTCGAGGCTGT
ATTCCCAATTCTATTTCTGAAATACGAGGGTTGGTATGTGAGGACATTTCTGGTGGACTG
GAGGATATTCCTATTCCCGCAACCAATTTAGTTGATGATCCACCTGTAGCACCGACAGGT
TTCACTTATAGCAAGCATATTATATGCGCCAAAGGTATAAAGCTCCCTTCAGCTTCCACA
GGATGCAAGTGTCGTGGTTCATGTCTTGATCCAAGAGTTTGTTCTTGCGCTAAACTCAAT
GGTTCTGATTTTCCCTATGTTCACAAAGATGGTGGAAGACTTATTGAGCCAAAGGCTGTT
GTTTTTGAATGTGGTCCAAATTGTGGATGTGGACCTGCCTGTGTCAACCGCACTTCTCAG
AAAGGATTGAGATATCGGCTTGAGGTTTTTCGTACTCCAAACAAGGGCTGGGGTGTGAGA
TCATGGGATTATATACCTTCTGGAGCAACCATTTGTGAATACATTGGTTTTCTAATGAAG
ACAGATCATATTGACCCTGCAGCAGAAAACAACTATGTTTTTGACATTGATTGCTTGCAA
ACAATGAAAGGGCTGGATGGGAGGGAGAGACGGTTGGGTGAGGTTTCTTTGCCAGGATAT
TGGCAGAAGGATGTTGAGAAGACTTCAGATGGAGGGCCAGAGTATTGCATTGATGCAGTC
TCTGTTGGCAATGTTGCGAGGTTTATTAATCATAGTTGTCAACCTAATTTATTTGTTCAA
TGTGTGTTAAGCTCCCATCACGACATTGGCTTGGCAAGAGTGGTGCTAATGGCAGCTGAC
AACATACCACCTCTGCAGGAACTCACATATGATTATGGCTATGTGCTGGATAGTGTTATG
GATCGTGATGGCAAGGTTAGACAAATGGCTTGCCACTGCGGTGCTGCTGATTGTCGTAGG
CGTCTGTATTAA

Peptide Sequence

PEP ID

XP_016452252.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like [Nicotiana tabacum]
Sequence

MVVAELSDHNNDCTEVVVPRRCSARIKTLQSQQEAQRTRCRSNDDPALEKKAKAHKARKA
DTPAMTPQAIDNDITGTNPPNDCTYDNHHPVAEASQSQSPHLNGDGTEKSAHLRVTETVR
RFNKHYLHLVQEEEIRCRRVQDEQKTKKHSKSKEAEDDGKRSSKRPDLKAISKMILAKEV
LNSEKIGSIPGIDVGHQFFSRAEMVVVGFHNHWLNGIDYVGQTAGKKGEYRGYRLPLAVS
IVLSGQYEDDQDNYEEVVYTGQGGNDLLGNKRQIKDQVMERGNLGLKNCMEQSVPVRVTR
GHRCVNSYVGKVYTYDGLYRVVNYWAEKGISGFTVFKYRLKRIEGQPVLTTNQVHFTRGC
IPNSISEIRGLVCEDISGGLEDIPIPATNLVDDPPVAPTGFTYSKHIICAKGIKLPSAST
GCKCRGSCLDPRVCSCAKLNGSDFPYVHKDGGRLIEPKAVVFECGPNCGCGPACVNRTSQ
KGLRYRLEVFRTPNKGWGVRSWDYIPSGATICEYIGFLMKTDHIDPAAENNYVFDIDCLQ
TMKGLDGRERRLGEVSLPGYWQKDVEKTSDGGPEYCIDAVSVGNVARFINHSCQPNLFVQ
CVLSSHHDIGLARVVLMAADNIPPLQELTYDYGYVLDSVMDRDGKVRQMACHCGAADCRR
RLY

Transcript Sequence

Gene sequence data has not been registered.